Training materials
Difficulty level: Beginner
and Contributors: Alexandre Cormier or Anatole Chessel or Anthony Bretaudeau or Christophe Antoniewski or Christopher Barnett or Mark Beaumont or Stéphanie Robin
-
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Galaxy Basics for everyone
• beginnerIntroduction to Galaxy Analyses -
slides
Prerequisites for building software/conda packages
• beginnerSoftware engineering Development in Galaxy -
slides
Tool Shed: sharing Galaxy tools
• beginnerSoftware engineering Development in Galaxy -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
slides
Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• beginnerTranscriptomics
- 1
- 2