Training materials
Difficulty level: Beginner
and Contributors: Alexandre Cormier or Alireza Khanteymoori or Anthony Bretaudeau or Christopher Barnett or Dr. Iain Milne or Lennart Martens or Nicola Soranzo
-
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Calling variants in diploid systems
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Single-cell quality control with scater
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Regression in Machine Learning
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Classification in Machine Learning
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Clustering in Machine Learning
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Galaxy Interactive Tools
• beginnerGalaxy Server administration ansible interactive-tools