Training materials
Target audience: Any student, postdoc or RA who has an interest ... or Anyone wishing to use bioinformatics resources ... or Biologists, Genomicists, Computer Scientists or Students
and Contributors: Alex Ostrovsky or David Christiany or Mateo Boudet or Ross Lazarus
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hands-on tutorial
Calling variants in non-diploid systems
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis microgalaxy prokaryote -
hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Hands-on for 'ToolFactory: Generating Tools From More Complex Scripts' tutorial
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hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
hands-on tutorial
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Biomarker candidate identification
• beginnerProteomics DDA human -
hands-on tutorial
Annotating a protein list identified by LC-MS/MS experiments
• beginnerProteomics DDA human -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote
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