Training materials
Contributors: Alex Ostrovsky or Avans Hogeschool or Cyril Pommier or Dr. Scooter Morris or Laura Leroi or Mallory Freeberg or Simon Gladman
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hands-on tutorial
Creating Galaxy tools from Conda Through Deployment
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Unicycler Assembly
• beginnerSequence assembly Genomics Microbiology Assembly microgalaxy prokaryote -
hands-on tutorial
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
hands-on tutorial
Differential abundance testing of small RNAs
• beginnerTranscriptomics -
hands-on tutorial
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell