Training materials
Difficulty level: Beginner
and Contributors: Alex Mitchell or Anatole Chessel or Anthony Bretaudeau or Dr. Nils Gehlenborg or Lucille Delisle or The Carpentries Lab
-
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner