Training materials
Contributors: Ajay Pillai or Célia Michotey or Erasmus+ Programme or Helena Rasche or John Davis or Mattias Strömberg or Pavankumar Videm
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lessons, e-learning
Introduction to Data Management Practices - Data organisation practices
• beginnerData management FAIR data data organisation FAIR CONVERGE -
lessons, e-learning
Introduction to Data Management Practices - Open Science and FAIR
• beginnerData management Open science FAIR data FAIR CONVERGE -
hands-on tutorial
RO-Crate in Python
• beginnerFAIR Data, Workflows, and Research jupyter-notebook ro-crate -
hands-on tutorial
Submitting workflows to LifeMonitor
• beginnerFAIR Data, Workflows, and Research ro-crate -
hands-on tutorial
Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)
•• intermediateMetabolomics -
hands-on tutorial
Pre-processing of 10X Single-Cell ATAC-seq Datasets
• beginner10x Single Cell epigenetics -
hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Customizing the look of Galaxy (Manual)
• beginnerGalaxy Server administration -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
Customizing the look of Galaxy
• beginnerGalaxy Server administration git-gat