Training materials
Scientific topics: Antimicrobial Resistance or Exomes
and Contributors: John Sundh or Bazante Sanders or Dr. Roy Ruddle or Eric C. Anderson or Ray Sajulga or Sergio Martínez Cuesta or Yvonne Kallberg or bioinformatics.ca
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
bioinformaticsdotca/IDE_2024
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eriqande/eca-bioinf-handbook
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hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy