Training materials
Difficulty level: Beginner
and Target audience: Students
and Contributors: John Sundh or Anika Erxleben or Anne-Françoise Adam-Blondon or Daniel Faria or Ray Sajulga or The Carpentries
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hands-on tutorial
RNA-seq Alignment with STAR
• beginnerTranscriptomics -
hands-on tutorial
Exome sequencing data analysis for diagnosing a genetic disease
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Formation of the Super-Structures on the Inactive X
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
Identification of the binding sites of the Estrogen receptor
• beginnerEpigenomics ChIP-seq Epigenetics work-in-progress -
hands-on tutorial
Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
• beginnerEpigenomics ChIP-seq Epigenetics -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Python - Flow Control
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook
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