Training materials
Scientific topics: DNA-Seq or Software engineering
and Contributors: Federico Bianchini or Jeroen Gilis or Mark Beaumont or Nicola Soranzo or Stephan Nylinder or The Carpentries Lab
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carpentries-lab/metagenomics-workshop
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carpentries-lab/metagenomics-analysis
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
slides
Scripting Galaxy using the API and BioBlend
• beginnerSoftware engineering Development in Galaxy -
slides
Tool Dependencies and Conda
• beginnerSoftware engineering Development in Galaxy -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy