Training materials
Contributors: @posit-pbc or Anatole Chessel or Bazante Sanders or Dr. Steve Jupe or Eija Korpelainen or Pavankumar Videm or Ray Sajulga or Timothy J. Griffin
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hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat
• beginner10x Single Cell paper-replication -
hands-on tutorial
Generating a single cell matrix using Alevin and combining datasets (bash + R)
• beginner10x Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Inferring single cell trajectories with Scanpy
• beginner10x Single Cell paper-replication -
hands-on tutorial
Filter, plot, and explore single cell RNA-seq data with Seurat (R)
• beginner10x R Single Cell jupyter-notebook paper-replication rmarkdown-notebook -
hands-on tutorial
Clinical-MP-4-Quantitation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-5-Data Interpretation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-3-Verification
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-2-Discovery
• beginnerProteomics label-TMT11 -
hands-on tutorial
Clinical-MP-1-Database-Generation
• beginnerProteomics label-TMT11 -
hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health