Training materials
Content provider: SIB Swiss Institute of Bioinformatics
and Difficulty level: Beginner
and Keywords: Docker or biodiversity or coronavirus or data management
-
Make your research FAIRer with Quarto, GitHub and Zenodo
• beginnerFAIR data management reproducible research -
Biodiversity bioinformatics: from large-scale phylogenomics to gene families and functions
• beginnerbiodiversity non model organisms evolution and phylogeny genes and genomes comparative genomics evolutionary biology training marc robinson-rechavi group robert waterhouse group christophe dessimoz group -
Introduction to Containers and Snakemake for Reproducible Research
• beginnercontainer data management high-performance computing reproducibility workflows marc robinson-rechavi group training -
Introduction to FAIR Research Data Management & Data Management Plan
• beginnertraining reproducibility data management data security open data mark ibberson group -
Introduction to openBIS
• beginnerbasic research data management data visualisation experimental biology interoperability reproducibility training -
Version Control with Git
• beginnerprogramming reproducibility data management -
Gene Expression made Useful Easily: Tools and Database of Bgee
• beginnerBgee genes and genomes evolution and phylogeny services and resources comparative genomics database curation data management data visualisation transcriptomics training marc robinson-rechavi group -
First Steps with Python in Life Sciences
• beginnerdata management data visualisation programming reproducibility training torsten schwede & thierry sengstag group mark ibberson group -
Docker and Singularity for Reproducible Research: Getting Started with Containers
• beginnerreproducibility container data management data security high-performance computing -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling