Training materials
Content provider: GTN
and Contributors: Andrea Bagnacani or CRUK CI Bioinformatics Core or Cristóbal Gallardo or Janick Mathys or Lieven Clement or Pedro Fernandes or Sundeep Agarwal
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hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Visualization of RNA-Seq results with CummeRbund
• beginnerTranscriptomics -
hands-on tutorial
Understanding Galaxy history system
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses -
slides
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• beginnerSequence assembly Assembly covid19 -
slides
Visualization of RNA-Seq results with CummeRbund
• beginnerTranscriptomics -
slides
Mapping
• beginnerSequence analysis