Training materials
Scientific topics: Drug discovery or Microbial ecology or Personalised medicine or Phylogenetics or Workflows
and Content provider: PerMedCoE or SIB Swiss Institute of Bioinformatics
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
e-learning
Interpret phylogenetic data to track SARS-CoV-2 evolution
• beginnerVirology Phylogenetics SARS-CoV-2 -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Tutorial
Tutorials on COBREXA
•• intermediatePersonalised medicine Simulation experiment Modelling and simulation cell-level simulations Biomodelling HPC -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
e-learning
Phylogenetics of animal pathogens: basic principles and applications
• beginnerPhylogenetics Veterinary medicine Animal pathogens