Training materials
Content provider: CINECA PROJECT or SIB Swiss Institute of Bioinformatics
and Keywords: Data analysis or Semantic Framework or algorithms or computer-science or high-performance computing
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Introduction to Containers and Snakemake for Reproducible Research
• beginnercontainer data management high-performance computing reproducibility workflows marc robinson-rechavi group training -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
e-learning
Explore and Visualize Your Data with Python
•• intermediateData visualisation Bioinformatics Python Data analysis -
Docker and Singularity for Reproducible Research: Getting Started with Containers
• beginnerreproducibility container data management data security high-performance computing -
Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research