Training materials
Authors: Cristóbal Gallardo
and Contributors: Avans Hogeschool or Bang Wong or Bazante Sanders or Cristóbal Gallardo or Mateusz Kuzak or Matthias Fahrner or Michael Ball or The Carpentries Lab or Vicky Schneider
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hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
VGP assembly pipeline - short version
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Hands-on for '16S Microbial analysis with Nanopore data' tutorial
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hands-on tutorial
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses -
slides
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• beginnerSequence assembly Assembly covid19 -
slides
Mapping
• beginnerSequence analysis