Training materials
Authors: Laura Leroi or Saskia Hiltemann
and Contributors: Allegra Via or Computational Biology and Bioinformatics at UCL... or Dr. Scooter Morris or Erasmus+ Programme or Subina Mehta
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hands-on tutorial
Genomic Data Visualisation with JBrowse
• beginnerVisualisation gmod jbrowse1 -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
slides
Circos
• beginnerVisualisation -
slides
Slides for 'Introduction to metatranscriptomics' tutorial
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hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Mapping
• beginnerSequence analysis -
slides
Quality Control
• beginnerSequence analysis