Training materials
Authors: Laura Leroi or Maria Doyle or Saskia Hiltemann
and Contributors: Allegra Via or Erasmus+ Programme or Gildas Le Corguillé or Lennart Martens or Pavankumar Videm or Robert Andrews
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hands-on tutorial
Genomic Data Visualisation with JBrowse
• beginnerVisualisation gmod jbrowse1 -
hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
slides
Circos
• beginnerVisualisation -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Mapping
• beginnerSequence analysis -
slides
Quality Control
• beginnerSequence analysis