Training materials
Difficulty level: Intermediate
and Authors: Jonathan Karr or Linelle Abueg or Marta Lloret Llinares or Michelle Brazas or Simon Andrews
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research -
Video
Status Update Code of Conduct: Teaming up & Talking about it
•• intermediateGDPR Healthcare research data harmonization -
Tutorial, Documentation
BioSimulators tutorial and help
•• intermediateSystems biology Computational biology Simulation experiment Modelling and simulation Modeling biomodel dynamic simulations COMBINE OMEX SED-ML SBML BNGL -
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Analysing bisulfite methylation sequencing data
•• intermediateDNA methylation -
RNA-Seq Analysis
•• intermediateRNA-Seq -
Plotting complex figures with R
•• intermediateGraph plotting R Programming Babraham Institute