Training materials
Resource type: Tutorial
and Authors: Javi Conejero or Kristina Hanspers or Stefano Mangiola or bagnacan or erasche or fidelram
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Tutorial
Tutorial on using existing PerMedCoE Building Blocks and workflows
•• intermediateBioinformatics Workflows Personalised medicine Building blocks -
Tutorial, hands-on tutorial
WikiPathways Academy
• beginnerBiology Systems biology Pathway WikiPathways Biocuration -
Tutorial
Tutorial on developing Building Blocks
•• intermediateBioinformatics Workflows Personalised medicine HPC building blocks -
Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
Tutorial
Galaxy Server administration - Ansible
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Tutorial
Data Manipulation - Collections: Rule Based Uploader
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Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the Estrogen receptor
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund