Training materials
Licence: Creative Commons Attribution 4.0 International
and Authors: Jared Simpson or Jessica Kirkpatrick krkptrc2@illinois.edu or Mark Fernandes or Ray Sajulga or Tuur Muyldermans or pajanne
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hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 2: Database Search' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 3: Novel peptide analysis' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
hands-on tutorial
Hands-on for 'Metatranscriptomics analysis using microbiome RNA-seq data (short)' tutorial
• beginnerMetagenomics metagenomics metatranscriptomics -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Presentation
Reproducible data analysis with RStudio, github and Rmarkdown