Training materials
Authors: Florian Christoph Sigloch or Gildas Le Corguillé
and Contributors: Bang Wong or Bioinformatics, Rockefeller University or Björn Grüning or Dr. Roy Ruddle or Dr. Scooter Morris or Jamie Edwards or Manimozhiyan Arumugam or Markus Englund or Nicola Mulder or Sonika Tyagi or Stéphanie Robin
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hands-on tutorial
Secretome Prediction
•• intermediateProteomics human work-in-progress -
hands-on tutorial
Label-free versus Labelled - How to Choose Your Quantitation Method
• beginnerProteomics DDA -
hands-on tutorial
Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
••• advancedProteomics DDA SILAC -
hands-on tutorial
Peptide and Protein ID using SearchGUI and PeptideShaker
• beginnerProteomics DDA HeLa -
hands-on tutorial
Detection and quantitation of N-termini (degradomics) via N-TAILS
•• intermediateProteomics -
hands-on tutorial
Peptide and Protein ID using OpenMS tools
••• advancedProteomics DDA HeLa -
hands-on tutorial
Protein FASTA Database Handling
• beginnerProteomics DDA -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy