Training materials
Content provider: CSC - IT Center for Science or Galaxy Training or PerMedCoE
and Authors: Erwan Corre or Maria Lehtivaara or bgruening
-
Training materials, Series of videos
Visium data analysis (spatially resolved transcriptomics) 2022
-
hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'De novo transcriptome assembly, annotation, and differential expression analysis' tutorial
-
slides
Quality Control
-
Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
Tutorial
Genome Annotation - Genome Annotation
-
Tutorial
Contributing to the Galaxy Training Material - Running the Galaxy Training material website locally