Training materials
Scientific topics: Medical informatics or Transcriptomics
and Authors: Erwan Corre or Integrative Computational Biology and Multiomic... or Jonathan Manning or Maria Doyle or Markus Wolfien or Monash Data Fluency
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slides
Introduction to Transcriptomics
• beginnerTranscriptomics -
ncl-icbam/ismb-tutorial-2023
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MonashDataFluency/r-linear
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hands-on tutorial
Combining single cell datasets after pre-processing
• beginnerTranscriptomics 10x Single Cell paper-replication -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot in R
•• intermediateTranscriptomics interactive-tools -
hands-on tutorial
3: RNA-seq genes to pathways
• beginnerTranscriptomics mouse -
hands-on tutorial
GO Enrichment Analysis
• beginnerTranscriptomics -
hands-on tutorial
2: RNA-seq counts to genes
• beginnerTranscriptomics QC limma-voom mouse
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