Training materials
Authors: Erasmus+ Programme or Fotis E. Psomopoulos or Nicola Soranzo
and Contributors: Dr. Nils Gehlenborg or Dr. Simon Li or Helena Rasche or Laura Leroi or Mateo Boudet
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hands-on tutorial
Scripting Galaxy using the API and BioBlend
• beginnerSoftware engineering Development in Galaxy jupyter-notebook -
hands-on tutorial
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq -
hands-on tutorial
External Authentication
• beginnerGalaxy Server administration authentication -
hands-on tutorial
Galaxy Tool Management with Ephemeris
• beginnerGalaxy Server administration git-gat tools -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
slides
Connecting Galaxy to a compute cluster
• beginnerGalaxy Server administration features -
slides
Galaxy Tool Management with Ephemeris
• beginnerGalaxy Server administration -
slides
A Short Introduction to Galaxy
• beginnerIntroduction to Galaxy Analyses
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