Training materials
Difficulty level: Beginner
and Authors: Eija Korpelainen or Emma Griffiths or Gary Bader or Maria Doyle or Nicola Soranzo or Tuur Muyldermans
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hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerdev jupyter-notebook -
hands-on tutorial
Visualization of RNA-Seq results with Volcano Plot
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Hands-on for 'A short introduction to Galaxy' tutorial
• beginnerintroduction español -
hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2 -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Video
Useful ontologies for harmonizing cohort data
• beginnerData integration and warehousing Data management Ontology and terminology Ontologies Cohort data data annotation
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