Training materials
Authors: Egon Willighagen or Jan Slifka or Jeff Xia or Marius van den Beek or Mathieu Bourgey or Melanie Föll or Mijke Jetten or Rachel Lyne
-
slides
Introduction to proteomics, protein identification, quantification and statistical modelling
• beginnerProteomics -
Presentation
Workshop FAIR & Data stewardship for the ITN NUTRIOME project (2024)
• beginnerNutritional science Data management FAIR data Data handling Analysis data stewardship data life cycle Training FAIR Nutrition -
Training materials
ELITMa Module "Data Management Strategy" (Finland 28-29 June 2023)
• beginnerResearch Data Management RDM Strategy Training -
Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
Creating InChIKeys for IUPAC names
-
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
MaxQuant and MSstats for the analysis of TMT data
• beginnerProteomics DDA TMT