Training materials
Difficulty level: Intermediate
and Authors: Egon Willighagen or Enis Afgan or Erasmus+ Programme or Janick Mathys or Nicola Soranzo or Personalized Health Informatics Group
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (prokaryotes)' tutorial
•• intermediategenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'Introduction to Machine Learning using R' tutorial
•• intermediatestatistics interactive-tools -
hands-on tutorial
Hands-on for 'Managing Galaxy on Kubernetes' tutorial
•• intermediateadmin kubernetes -
hands-on tutorial
Hands-on for 'Galaxy Installation on Kubernetes' tutorial
•• intermediateadmin kubernetes -
hands-on tutorial
Hands-on for 'CLI Educational Game - Bashcrawl' tutorial
•• intermediatedata-science game bash jupyter-notebook
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