Training materials
Include archived: true
and Authors: Dilmurat Yusuf or Mateo Boudet or Michele Maroni or Nicola Soranzo
and Contributors: Bérénice Batut or Helena Rasche or Thomas Denecker
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hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Scripting Galaxy using the API and BioBlend
• beginnerSoftware engineering Development in Galaxy jupyter-notebook -
hands-on tutorial
Reference-based RNA-Seq data analysis
• beginnerTranscriptomics QC bulk collections cyoa drosophila rna-seq -
hands-on tutorial
External Authentication
• beginnerGalaxy Server administration authentication -
hands-on tutorial
Galaxy Tool Management with Ephemeris
• beginnerGalaxy Server administration git-gat tools -
hands-on tutorial
Galaxy Basics for genomics
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
From peaks to genes
• beginnerIntroduction to Galaxy Analyses -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Connecting Galaxy to a compute cluster
• beginnerGalaxy Server administration features
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