Training materials
Scientific topics: Software engineering
and Authors: Denise Slenter or Kaivan Kamali or Manuel Corpas or The Carpentries or Wolfgang Maier or Wolmar Nyberg Åkerström
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hands-on tutorial
Data visualisation Olympics - Visualization in R
• beginnerSoftware engineering Foundations of Data Science R cyoa jupyter-notebook rmarkdown-notebook -
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
hands-on tutorial
Python - Coding Style
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Virtual Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Conda Environments For Software Development
•• intermediateSoftware engineering Foundations of Data Science conda jupyter-notebook -
hands-on tutorial
Python - Testing
•• intermediateSoftware engineering Foundations of Data Science jupyter-notebook -
hands-on tutorial
Variant Calling Workflow
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
SQL with Python
•• intermediateSoftware engineering Foundations of Data Science Python SQL jupyter-notebook -
hands-on tutorial
SQL with R
•• intermediateSoftware engineering Foundations of Data Science R SQL jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Python - Flow Control
• beginnerSoftware engineering Foundations of Data Science jupyter-notebook