Training materials
Authors: Cristóbal Gallardo or Frédéric de Lamotte or Martin Morgan or Simon Gladman or allegra.via Via or shiltemann
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hands-on tutorial
Downloading and Deleting Data in Galaxy
• beginnerUsing Galaxy and Managing your Data -
hands-on tutorial
Introduction to Genomics and Galaxy
• beginnerIntroduction to Galaxy Analyses -
slides
Genome annotation with Prokka
• beginnerGenome Annotation prokaryote -
slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Unicycler Assembly
• beginnerSequence assembly Assembly prokaryote -
slides
Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads
• beginnerSequence assembly Assembly covid19 -
slides
An Introduction to Genome Assembly
• beginnerSequence assembly Assembly -
slides
De Bruijn Graph Assembly
• beginnerSequence assembly Assembly -
slides
Reference Data with CVMFS
• beginnerGalaxy Server administration -
hands-on tutorial
Galaxy Installation with Ansible
• beginnerDatabase management Informatics Data management Galaxy Server administration ansible deploying git-gat