Training materials
Target audience: Students
and Authors: Cristóbal Gallardo or Denise Slenter or Eija Korpelainen or Gary Bader or Laura Cooper or Melanie Föll or Monique Zahn
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hands-on tutorial
ERGA post-assembly QC
• beginnerSequence assembly Assembly -
slides
Whole transcriptome analysis of Arabidopsis thaliana
• beginnerTranscriptomics -
slides
Identification of non-canonical ORFs and their potential biological function
• beginnerTranscriptomics -
slides
Introduction to proteomics, protein identification, quantification and statistical modelling
• beginnerProteomics -
hands-on tutorial
Visualisation with Circos
• beginnerVisualisation -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateassembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Hands-on for 'Analysis of plant scRNA-Seq Data with Scanpy' tutorial
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hands-on tutorial
Hands-on for 'MaxQuant and MSstats for the analysis of TMT data' tutorial