Training materials
Keywords: ELIXIR-CONVERGE or Shell or data management or prokaryote
and Authors: Cees Hof or Federico Bianchini or SIB Swiss Institute of Bioinformatics
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Make your research FAIRer with Quarto, GitHub and Zenodo
• beginnerFAIR data management reproducible research -
Introduction to Containers and Snakemake for Reproducible Research
• beginnercontainer data management high-performance computing reproducibility workflows marc robinson-rechavi group training -
Introduction to FAIR Research Data Management & Data Management Plan
• beginnertraining reproducibility data management data security open data mark ibberson group -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
Introduction to openBIS
• beginnerbasic research data management data visualisation experimental biology interoperability reproducibility training -
Version Control with Git
• beginnerprogramming reproducibility data management -
Gene Expression made Useful Easily: Tools and Database of Bgee
• beginnerBgee genes and genomes evolution and phylogeny services and resources comparative genomics database curation data management data visualisation transcriptomics training marc robinson-rechavi group -
First Steps with Python in Life Sciences
• beginnerdata management data visualisation programming reproducibility training torsten schwede & thierry sengstag group mark ibberson group -
Docker and Singularity for Reproducible Research: Getting Started with Containers
• beginnerreproducibility container data management data security high-performance computing -
Slides
Slides from Data Management Planning Workshop
• beginnerData management Deposition Data retrieval Data handling Data management plan data management
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