Training materials
Scientific topics: Computational biology or Mass spectrometry or Pathway or network or Simulation experiment or Transcriptomics
and Authors: Canadian Bioinformatics Workshops or Grégoire Rossier or Jonathan Karr or Mehmet Tekman
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bioinformatics-ca/PNA_2021
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bioinformatics-ca/RNA_2021
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bioinformatics-ca/CAN_2021
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e-learning
High Performance Computing in Life Sciences
•• intermediateComputational biology High performance computing Data storage -
hands-on tutorial
Inferring single cell trajectories with Scanpy (Python)
• beginnerTranscriptomics 10x Python Single Cell jupyter-notebook paper-replication -
hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
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hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants