Training materials
Contributors: Anthony Bretaudeau
and Authors: Boris Steipe or Dayane Araujo or Erwan Corre or Fouad Yousif or Jessica Kirkpatrick krkptrc2@illinois.edu or Samaha, Georgina (orcid: 0000-0003-0419-1476) or Simon Gladman
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
hands-on tutorial
Hands-on for 'Galaxy Interactive Tools' tutorial
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slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control
• beginnerSequence analysis