Training materials
Authors: Björn Grüning or Bruno Gaeta or Bérénice Batut or Manuel Corpas or Personalized Health Informatics Group or nekrut or shiltemann
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hands-on tutorial
Learning about one gene across biological resources and formats
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
One protein along the UniProt page
• beginnerSoftware engineering Foundations of Data Science -
hands-on tutorial
Adding and updating best practice metadata for Galaxy tools using the bio.tools registry
• beginnerSoftware engineering Development in Galaxy -
Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Hands-on for 'Taxonomic Profiling and Visualization of Metagenomic Data' tutorial
• beginnerMetagenomics metagenomics taxonomic profiling -
slides
Slides for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
slides
Slides for 'Galaxy from an administrator's point of view' tutorial
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hands-on tutorial
Hands-on for 'Assembly of metagenomic sequencing data' tutorial
• beginnerMetagenomics metagenomics assembly