Training materials
Difficulty level: Beginner
and Authors: Bert Overduin @bert or Eija Korpelainen or Erasmus+ Programme or Jared Simpson or Julie Sullivan or Maria Victoria . or Various authors or pajanne
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hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'CLI basics' tutorial
• beginnerSoftware engineering data-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Introduction to Python' tutorial
• beginnerSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Quality Control' tutorial
• beginnerSequence analysis sequence-analysis -
Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq -
course materials, Video
Single cell RNA-seq data analysis with Chipster
• beginnerRNA-Seq RNA-Seq Single Cell technologies scRNA-seq -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR -
course materials, Video
Community analysis of amplicon sequencing data (16S rRNA)
• beginner -
course materials, Video
Virus detection using small RNA-seq
• beginnerRNA-Seq
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