Training materials
Difficulty level: Intermediate
and Authors: Bert Meerman or Christine Staiger or Emma Leith or Janick Mathys or Marta Lloret Llinares or Paul Yorke
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Hands-on for 'metaQuantome 3: Taxonomy' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'metaQuantome 2: Function' tutorial
•• intermediateproteomics microbiome -
hands-on tutorial
Hands-on for 'metaQuantome 1: Data creation' tutorial
•• intermediateproteomics microbiome -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research -
Video
Status Update Code of Conduct: Teaming up & Talking about it
•• intermediateGDPR Healthcare research data harmonization -
course materials
Introduction to Persistent Identifiers
•• intermediateData management system relevant metadata for data PID metadata Python API pyhandle Persistent Identifiers -
Training materials
Essential Steps of the FAIRification Process
•• intermediateFAIR data stewardship metadata linked data -
hands-on tutorial
NGS analysis
•• intermediateSequencing NGS Next Generation Sequencing