Training materials
Authors: Bazante Sanders or Gildas Le Corguillé or Jessica Kirkpatrick krkptrc2@illinois.edu or Wolfgang Maier or carpentries-incubator
-
hands-on tutorial
Hands-on for 'Exome sequencing data analysis for diagnosing a genetic disease' tutorial
-
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediatevariant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'Identification of somatic and germline variants from tumor and normal sample pairs' tutorial
-
hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial
-
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Oxford Nanopore MinION Data' tutorial
-
hands-on tutorial
Hands-on for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
•• intermediateassembly covid19 -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Illumina MiSeq Data' tutorial
-
hands-on tutorial
Hands-on for 'De novo transcriptome assembly, annotation, and differential expression analysis' tutorial
-
hands-on tutorial
Hands-on for 'Pre-processing of Single-Cell RNA Data' tutorial
-
hands-on tutorial
Hands-on for 'Python - Subprocess' tutorial
•• intermediatedata-science jupyter-notebook