Training materials
Difficulty level: Beginner
and Authors: Bazante Sanders or Fouad Yousif or Gary Bader or Helen Brown or Jared Simpson or Krzysztof Poterlowicz or Simon Andrews
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hands-on tutorial
Identification of AMR genes in an assembled bacterial genome
• beginnerWhole genome sequencing Public health and epidemiology Genomics Microbiology Sequence analysis Infectious disease Antimicrobial Resistance Genome Annotation amr gmod illumina jbrowse1 microgalaxy one-health -
slides
EWAS Epigenome-Wide Association Studies Introduction
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Data management in Medicinal Chemistry
• beginnerComputational chemistry FAIR Data, Workflows, and Research computational-chemistry data-management fair medicinal-chemistry -
hands-on tutorial
REMBI - Recommended Metadata for Biological Images – metadata guidelines for bioimaging data
• beginnerBioimaging FAIR REMBI -
hands-on tutorial
FAIR Bioimage Metadata
• beginnerFAIR bioimage Bioimage Metadata -
hands-on tutorial
FAIR Galaxy Training Material
• beginnerContributing to the Galaxy Training Material fair gtn training -
hands-on tutorial
Somatic Variant Discovery from WES Data Using Control-FREEC
• beginnerGenetic variation Variant Analysis -
hands-on tutorial
Infinium Human Methylation BeadChip
• beginnerEpigenomics Epigenetics -
hands-on tutorial
Genome Assembly of MRSA from Oxford Nanopore MinION data (and optionally Illumina data)
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Antimicrobial Resistance Assembly amr assembly gmod jbrowse1 microgalaxy nanopore -
hands-on tutorial
Genome Assembly of a bacterial genome (MRSA) sequenced using Illumina MiSeq Data
• beginnerSequence assembly Whole genome sequencing Public health and epidemiology Genomics Microbiology Assembly assembly illumina microgalaxy