Training materials
Authors: Bastian Schiffthaler @bastian or Mehmet Tekman or Samaha, Georgina (orcid: 0000-0003-0419-1476) or Timothy J. Griffin or bebatut or shiltemann
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WEBINAR: Getting started with whole genome mapping and variant calling on the command line
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WEBINAR: Where to go when your bioinformatics outgrows your compute
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WEBINAR: High performance bioinformatics: submitting your best NCMAS application
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hands-on tutorial
Hands-on for 'Trajectory Analysis using Python (Jupyter Notebook) in Galaxy' tutorial
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hands-on tutorial
Pre-processing of 10X Single-Cell RNA Datasets
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Pre-processing of Single-Cell RNA Data
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Clustering 3K PBMCs with Scanpy
• beginnerTranscriptomics 10x Single Cell -
hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Downstream Single-cell RNA analysis with RaceID
• beginnerTranscriptomics Single Cell -
hands-on tutorial
Bulk RNA Deconvolution with MuSiC
• beginnerTranscriptomics Single Cell transcriptomics