Training materials
Resource type: Tutorial
and Content provider: CSC - IT Center for Science or Galaxy Training or PerMedCoE
and Authors: Bartosz Bartmanski or Jesse Harrison or joachimwolff
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Tutorial
Tutorial on working with computing clusters
•• intermediateHPC -
Tutorial
Tutorial on using MPI with containers
•• intermediateMPI Containers Computer Programming Documentation and help -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Tutorial
Genome Annotation - Genome Annotation
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Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Tutorial
Introduction to Galaxy Analyses - IGV Introduction
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Tutorial
ChIP-Seq data analysis - Identification of the binding sites of the T-cell acute lymphocytic leukemia protein 1 (TAL1)
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Tutorial
Epigenetics - DNA Methylation data analysis
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Tutorial
Sequence analysis - Mapping