Training materials
Difficulty level: Intermediate
and Authors: Bartosz Bartmanski or Evangelos Pafilis or Henrik Nortamo or Jana Broncova
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Tutorial
Tutorial on working with computing clusters
•• intermediateHPC -
Documentation, Presentation
ELIXIR AAI Engagement Meetings Materials
•• intermediateComputer science AAI IAM Authentication authorisation -
Tutorial
Tutorial on using MPI with containers
•• intermediateMPI Containers Computer Programming Documentation and help -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Webinar, Presentation, Documentation
Integrating to ELIXIR AAI -- instructions for developers
•• intermediateComputer science AAI IAM Authentication authorisation -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining