Training materials
Difficulty level: Intermediate
and Authors: Bartosz Bartmanski or Daniel Blankenberg or Gildas Le Corguillé or James Johnson or Jan Slifka or Martin Čech
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hands-on tutorial
Hands-on for 'Proteogenomics 1: Database Creation' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Hands-on for 'Proteogenomics 2: Database Search' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Peptide Library Data Analysis
•• intermediateProteomics -
hands-on tutorial
Hands-on for 'Machine Learning Modeling of Anticancer Peptides' tutorial
•• intermediateproteomics ML cancer -
hands-on tutorial
Hands-on for 'Proteogenomics 3: Novel peptide analysis' tutorial
•• intermediateproteomics proteogenomics -
hands-on tutorial
Mass spectrometry: LC-MS preprocessing with XCMS
•• intermediateMetabolomics -
Tutorial
Tutorial on CARNIVAL
•• intermediateMolecular interactions, pathways and networks Gene expression Omics RNA-Seq Network analysis RNA-Seq analysis HPC Signaling RNAseq, transcriptomics -
Tutorial
Tutorial on CellNOpt
•• intermediatePersonalised medicine Simulation experiment Molecular interactions, pathways and networks Transcription factors and regulatory sites Modelling and simulation HPC Biomodelling Signalling -
Training materials
FAIR principles applied to bioinformatics
•• intermediateFAIR Reproducible Science Open science Data analysis Data processing