Training materials
Scientific topics: Data visualisation or Microbial ecology or Protein interactions or Transcriptomics
and Authors: Bérénice Batut or Janick Mathys or Lars Juhl Jensen
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hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Hands-on for 'Pre-processing of Single-Cell RNA Data' tutorial
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hands-on tutorial
Hands-on for 'Clustering 3K PBMCs with Scanpy' tutorial
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hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnertranscriptomics bulk rna-seq collections drosophila QC cyoa -
slides
Introduction to 'Transcriptomics'
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation