Training materials
Authors: AstraZeneca or Erwan Corre or Jan Slifka or Laura Leroi or Martin Morgan or Samaha, Georgina (orcid: 0000-0003-0419-1476) or UC Davis Bioinformatics Core Training Page
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WEBINAR: Getting started with whole genome mapping and variant calling on the command line
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateassembly quality control -
slides
Genome assembly quality control.
• beginnerSequence assembly Assembly -
WEBINAR: Where to go when your bioinformatics outgrows your compute
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WEBINAR: High performance bioinformatics: submitting your best NCMAS application
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hands-on tutorial
Masking repeats with RepeatMasker
• beginnerGenome Annotation eukaryote -
hands-on tutorial
Genome assembly using PacBio data
•• intermediateSequence assembly Assembly assembly pacbio -
hands-on tutorial
De novo transcriptome assembly, annotation, and differential expression analysis
• beginnerTranscriptomics -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis