Training materials
Difficulty level: Beginner
and Authors: Anup Kumar or Christine Staiger or Dayane Araujo or Kathi Zarnack or Maria Victoria ... or Marius van den Beek
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hands-on tutorial
Fine tune large protein model (ProtTrans) using HuggingFace
• beginnerStatistics and probability Statistics and machine learning deep-learning dephosphorylation-site-prediction fine-tuning interactive-tools jupyter-lab machine-learning -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
hands-on tutorial
Monitoring Galaxy and Pulsar with Sentry
• beginnerGalaxy Server administration ansible git-gat -
hands-on tutorial
Use Apptainer containers for running Galaxy jobs
• beginnerGalaxy Server administration ansible git-gat jobs -
hands-on tutorial
From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis
• beginnerGenetic variation Variant Analysis covid19 one-health virology -
hands-on tutorial
A Docker-based interactive Jupyterlab powered by GPU for artificial intelligence in Galaxy
• beginnerStatistics and probability Statistics and machine learning deep-learning image-segmentation interactive-tools jupyter-lab machine-learning protein-3D-structure -
hands-on tutorial
Classification in Machine Learning
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Regression in Machine Learning
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Machine learning: classification and regression
• beginnerStatistics and probability Statistics and machine learning -
hands-on tutorial
Age prediction using machine learning
• beginnerStatistics and probability Statistics and machine learning