Training materials
Authors: Anton Nekrutenko or Erasmus+ Programme
and Contributors: Anthony Bretaudeau or CRUK CI Bioinformatics Core or Dave Clements or David Philip Judge or Dr. Nils Gehlenborg
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hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (prokaryotes)' tutorial
•• intermediategenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'NGS data logistics' tutorial
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slides
Slides for 'Refining Genome Annotations with Apollo' tutorial
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slides
Deeper look into Genome Assembly algorithms
•• intermediateSequence assembly Assembly -
slides
Quality Control