Training materials
Authors: Anne Siegel or Björn Grüning or Gary Van Domselaar or Helena Rasche or Janick Mathys or Personalized Health Informatics Group
and Contributors: Anthony Bretaudeau or NU Knight Lab
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hands-on tutorial
Refining Genome Annotations with Apollo (prokaryotes)
•• intermediateGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation apollo2 gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
RNA-Seq analysis with AskOmics Interactive Tool
• beginnerTranscriptomics -
hands-on tutorial
Galaxy Interactive Tools
• beginnerGalaxy Server administration ansible interactive-tools -
hands-on tutorial
SQL Educational Game - Murder Mystery
•• intermediateSoftware engineering Foundations of Data Science SQL game jupyter-notebook -
slides
Refining Genome Annotations with Apollo
• beginnerGenome Annotation prokaryote -
slides
Tool development and integration into Galaxy
• beginnerSoftware engineering Development in Galaxy -
slides
Integrate and query local datasets and distant RDF data with AskOmics using Semantic Web technologies
• beginnerTranscriptomics -
hands-on tutorial
Galaxy Interactive Tools
• beginnerSoftware engineering Development in Galaxy -
hands-on tutorial
Galaxy Installation with Ansible
• beginnerDatabase management Informatics Data management Galaxy Server administration ansible deploying git-gat -
slides
Introduction to 'Genome Annotation'
•• intermediate