Training materials
Difficulty level: Beginner
and Authors: Anne Fouilloux or Bruno Gaeta or Ettore Murabito or Frédéric de Lamotte or Lars Juhl Jensen or Martin Morgan or Nicolas Delhomme @delhomme or Obi Griffith or Yo Yehudi or blankclemens
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Video
Parameter Scanning and Sampling in COPASI
• beginnerSimulation experiment Modelling and simulation Analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Metabolic Control Analysis in COPASI
• beginnerSimulation experiment Systems biology Modelling and simulation Analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
hands-on tutorial
How to reproduce published Galaxy analyses
• beginnerIntroduction to Galaxy Analyses -
hands-on tutorial
Galaxy Basics for everyone
• beginnerIntroduction to Galaxy Analyses -
Slides
FAIR data - Module 4 (share and publish data)
• beginnerBioinformatics Biology Data management data sharing Data publishing legal framework data warehouse licensing data reuse -
Slides
FAIR data - Module 3 (Metadata)
• beginnerBioinformatics Biology Data management Data handling metadata data annotation life science standards data sharing -
Slides
FAIR data - Module 2 (data life cycle)
• beginnerData management Biology Bioinformatics Data handling Data preserving Data storage -
Slides
FAIR data - Module 1 (research data)
• beginnermetadata Data Life Cycle Reproducibility Data management plan -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR
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