Training materials
Resource type: hands-on tutorial
and Authors: Anna Syme or Beatriz Serrano-Solano or Gary Bader or Maria Victoria ... or Monique Zahn or Nadia Goué or Nate Coraor
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hands-on tutorial
Server Maintenance: Cleanup, Backup, and Restoration
• beginnerDatabase management Informatics Data management Galaxy Server administration ansible deploying git-gat -
hands-on tutorial
Large genome assembly and polishing
• beginnerSequence assembly Assembly assembly nanopore polishing -
hands-on tutorial
Microbial Variant Calling
• beginnerGenetic variation Genomics Sequence assembly DNA polymorphism Microbiology Sequence analysis Variant Analysis gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Genome annotation with Prokka
• beginnerGenomics Microbiology Gene and protein families Sequence analysis Genome Annotation gmod jbrowse1 microgalaxy prokaryote -
hands-on tutorial
Chloroplast genome assembly
• beginnerSequence assembly Assembly jbrowse1 nanopore plants -
hands-on tutorial
VGP assembly pipeline: Step by Step
•• intermediateSequence assembly Assembly VGP eukaryote pacbio -
hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Analysis of plant scRNA-Seq Data with Scanpy
• beginnerTranscriptomics Single Cell paper-replication plants -
hands-on tutorial
Distributed Object Storage
• beginnerGalaxy Server administration ansible storage -
hands-on tutorial
Galaxy Interactive Tools
• beginnerGalaxy Server administration ansible interactive-tools